Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NcanP55066 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NcanP55066 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.53□□□□□ -1.52
NcanP55066 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NcanP55066 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NcanP55066 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NcanP55066 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NcanP55066 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NcanP55066 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NcanP55066 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NcanP55066 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NcanP55066 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NcanP55066 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NcanP55066 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NcanP55066 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
NcanP55066 Gm26140-201ENSMUST00000103807 110 ntBASIC5.53□□□□□ -1.52
NcanP55066 Gm25419-201ENSMUST00000104215 191 ntBASIC5.53□□□□□ -1.52
NcanP55066 Gm15206-201ENSMUST00000119143 454 ntBASIC5.53□□□□□ -1.52
NcanP55066 Gm11278-201ENSMUST00000121002 997 ntBASIC5.53□□□□□ -1.52
NcanP55066 Gm13808-201ENSMUST00000121353 184 ntBASIC5.53□□□□□ -1.52
NcanP55066 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.53□□□□□ -1.52
NcanP55066 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5.53□□□□□ -1.52
NcanP55066 Gm23501-201ENSMUST00000157744 256 ntBASIC5.53□□□□□ -1.52
NcanP55066 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.53□□□□□ -1.52
NcanP55066 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.53□□□□□ -1.52
NcanP55066 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NcanP55066 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NcanP55066 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.53□□□□□ -1.52
NcanP55066 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC5.53□□□□□ -1.52
NcanP55066 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC5.53□□□□□ -1.52
NcanP55066 Gm19131-201ENSMUST00000203408 789 ntBASIC5.53□□□□□ -1.52
NcanP55066 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.53□□□□□ -1.52
NcanP55066 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NcanP55066 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.53□□□□□ -1.52
NcanP55066 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NcanP55066 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NcanP55066 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NcanP55066 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NcanP55066 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.53□□□□□ -1.52
NcanP55066 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
NcanP55066 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.53□□□□□ -1.52
NcanP55066 Gm45093-201ENSMUST00000206859 2463 ntBASIC5.53□□□□□ -1.52
NcanP55066 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
NcanP55066 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.53□□□□□ -1.52
NcanP55066 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.52□□□□□ -1.53
NcanP55066 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
NcanP55066 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.52□□□□□ -1.53
NcanP55066 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.52□□□□□ -1.53
NcanP55066 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NcanP55066 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.52□□□□□ -1.53
NcanP55066 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
NcanP55066 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.52□□□□□ -1.53
NcanP55066 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NcanP55066 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 Gm14610-201ENSMUST00000118358 966 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm12994-201ENSMUST00000119601 447 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm12654-201ENSMUST00000120387 587 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm12007-201ENSMUST00000120978 597 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.52□□□□□ -1.53
NcanP55066 Gm3084-201ENSMUST00000169967 598 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm38040-201ENSMUST00000193505 225 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.52□□□□□ -1.53
NcanP55066 Gm2314-201ENSMUST00000200391 586 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm18462-201ENSMUST00000208112 417 ntBASIC5.52□□□□□ -1.53
NcanP55066 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.52□□□□□ -1.53
NcanP55066 AC159885.1-201ENSMUST00000222221 199 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm6988-201ENSMUST00000222676 375 ntBASIC5.52□□□□□ -1.53
NcanP55066 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC5.52□□□□□ -1.53
NcanP55066 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 Gm5321-201ENSMUST00000072050 447 ntBASIC5.52□□□□□ -1.53
NcanP55066 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.52□□□□□ -1.53
NcanP55066 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NcanP55066 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.52□□□□□ -1.53
NcanP55066 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NcanP55066 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NcanP55066 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NcanP55066 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
NcanP55066 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
NcanP55066 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NcanP55066 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.52□□□□□ -1.53
NcanP55066 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.51□□□□□ -1.53
NcanP55066 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NcanP55066 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.51□□□□□ -1.53
NcanP55066 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
NcanP55066 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms