Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm43437-201ENSMUST00000198535 3955 ntBASIC7.55□□□□□ -1.2
Cux1P53564 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cux1P53564 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cux1P53564 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Cux1P53564 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cux1P53564 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cux1P53564 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cux1P53564 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cux1P53564 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cux1P53564 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cux1P53564 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cux1P53564 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cux1P53564 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cux1P53564 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Cux1P53564 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cux1P53564 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.54□□□□□ -1.2
Cux1P53564 Gm14711-201ENSMUST00000117056 217 ntBASIC7.54□□□□□ -1.2
Cux1P53564 Gm14082-201ENSMUST00000118582 801 ntBASIC7.54□□□□□ -1.2
Cux1P53564 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Cux1P53564 Gm24251-201ENSMUST00000157324 114 ntBASIC7.54□□□□□ -1.2
Cux1P53564 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Cux1P53564 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Cux1P53564 Gm29196-201ENSMUST00000189239 618 ntBASIC7.54□□□□□ -1.2
Cux1P53564 Gm38221-201ENSMUST00000195146 365 ntBASIC7.54□□□□□ -1.2
Cux1P53564 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC7.54□□□□□ -1.2
Cux1P53564 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cux1P53564 Gm42869-201ENSMUST00000199953 2121 ntBASIC7.54□□□□□ -1.2
Cux1P53564 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cux1P53564 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cux1P53564 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Cux1P53564 Gm37764-201ENSMUST00000194664 2150 ntBASIC7.54□□□□□ -1.2
Cux1P53564 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.54□□□□□ -1.2
Cux1P53564 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cux1P53564 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cux1P53564 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC7.53□□□□□ -1.2
Cux1P53564 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Cux1P53564 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Cux1P53564 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cux1P53564 Gm7363-201ENSMUST00000119883 399 ntBASIC7.53□□□□□ -1.2
Cux1P53564 Gm13220-201ENSMUST00000121535 508 ntBASIC7.53□□□□□ -1.2
Cux1P53564 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cux1P53564 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Cux1P53564 Gm26404-201ENSMUST00000158498 109 ntBASIC7.53□□□□□ -1.2
Cux1P53564 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Cux1P53564 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Cux1P53564 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC7.53□□□□□ -1.2
Cux1P53564 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Cux1P53564 Gm44820-201ENSMUST00000207420 396 ntBASIC7.53□□□□□ -1.2
Cux1P53564 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Cux1P53564 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.53□□□□□ -1.2
Cux1P53564 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.53□□□□□ -1.2
Cux1P53564 AC118639.1-203ENSMUST00000228425 2016 ntBASIC7.53□□□□□ -1.2
Cux1P53564 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cux1P53564 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC7.53□□□□□ -1.2
Cux1P53564 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
Cux1P53564 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
Cux1P53564 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC7.53□□□□□ -1.2
Cux1P53564 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Cux1P53564 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
Cux1P53564 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cux1P53564 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cux1P53564 Gm44250-201ENSMUST00000203092 4229 ntBASIC7.53□□□□□ -1.2
Cux1P53564 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC7.52□□□□□ -1.2
Cux1P53564 Gm14881-201ENSMUST00000120366 372 ntBASIC7.52□□□□□ -1.2
Cux1P53564 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC7.52□□□□□ -1.2
Cux1P53564 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Cux1P53564 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC7.52□□□□□ -1.2
Cux1P53564 Gm37088-201ENSMUST00000193887 406 ntBASIC7.52□□□□□ -1.2
Cux1P53564 AC132112.1-201ENSMUST00000226354 505 ntBASIC7.52□□□□□ -1.2
Cux1P53564 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Cux1P53564 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Cux1P53564 Gm45853-201ENSMUST00000212310 3171 ntBASIC7.52□□□□□ -1.21
Cux1P53564 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Cux1P53564 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Cux1P53564 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC7.52□□□□□ -1.21
Cux1P53564 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Cux1P53564 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Cux1P53564 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Cux1P53564 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Cux1P53564 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Cux1P53564 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC7.52□□□□□ -1.21
Cux1P53564 Gm14610-201ENSMUST00000118358 966 ntBASIC7.52□□□□□ -1.21
Cux1P53564 Gm24371-201ENSMUST00000122662 267 ntBASIC7.52□□□□□ -1.21
Cux1P53564 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Cux1P53564 Gm24751-201ENSMUST00000157844 102 ntBASIC7.52□□□□□ -1.21
Cux1P53564 Gm22940-201ENSMUST00000158560 155 ntBASIC7.52□□□□□ -1.21
Cux1P53564 Gm20614-201ENSMUST00000177106 632 ntBASIC7.52□□□□□ -1.21
Cux1P53564 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC7.52□□□□□ -1.21
Cux1P53564 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC7.52□□□□□ -1.21
Cux1P53564 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
Cux1P53564 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Cux1P53564 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Cux1P53564 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Cux1P53564 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Cux1P53564 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
Cux1P53564 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Cux1P53564 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Cux1P53564 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Cux1P53564 AC153494.1-201ENSMUST00000218664 3041 ntBASIC7.51□□□□□ -1.21
Cux1P53564 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms