Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm2199-201ENSMUST00000119065 874 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm14945-201ENSMUST00000119556 1118 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm14267-201ENSMUST00000119751 496 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm16458-201ENSMUST00000121428 502 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm22106-201ENSMUST00000122544 127 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm25291-201ENSMUST00000122795 144 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.92□□□□□ -1.46
Shmt1P50431 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm24363-201ENSMUST00000158440 311 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
Shmt1P50431 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm21894-201ENSMUST00000179631 546 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm27985-201ENSMUST00000185112 378 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm35212-201ENSMUST00000196672 606 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm31532-201ENSMUST00000203555 767 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm3257-201ENSMUST00000207217 675 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm18645-201ENSMUST00000209593 651 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 AC157017.2-201ENSMUST00000218354 777 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.92□□□□□ -1.46
Shmt1P50431 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Shmt1P50431 AC113031.2-201ENSMUST00000226132 579 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 AC131068.1-201ENSMUST00000226891 482 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 AC112972.1-201ENSMUST00000227329 365 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm24525-201ENSMUST00000082917 151 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Mir337-201ENSMUST00000083592 97 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.92□□□□□ -1.46
Shmt1P50431 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Shmt1P50431 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Shmt1P50431 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Shmt1P50431 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Shmt1P50431 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm24265-201ENSMUST00000101833 141 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm14786-201ENSMUST00000117127 944 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm11561-201ENSMUST00000117429 417 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm13681-201ENSMUST00000117925 210 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm11826-201ENSMUST00000118781 438 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm12850-201ENSMUST00000119210 436 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm23233-201ENSMUST00000157301 137 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm24198-201ENSMUST00000157812 108 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm24393-201ENSMUST00000158135 97 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm24211-201ENSMUST00000158264 107 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm26170-201ENSMUST00000158419 148 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm22122-201ENSMUST00000175147 200 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm24407-201ENSMUST00000177864 141 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm27861-201ENSMUST00000183920 214 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.91□□□□□ -1.46
Shmt1P50431 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm18969-201ENSMUST00000189423 730 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm29592-201ENSMUST00000189434 370 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm4574-201ENSMUST00000207804 542 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm45777-201ENSMUST00000213009 301 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.91□□□□□ -1.46
Shmt1P50431 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Shmt1P50431 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC5.91□□□□□ -1.46
Shmt1P50431 AC166358.6-201ENSMUST00000221834 1206 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC5.91□□□□□ -1.46
Shmt1P50431 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Shmt1P50431 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Shmt1P50431 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms