Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc2P43407 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sdc2P43407 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc2P43407 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sdc2P43407 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sdc2P43407 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.34□□□□□ -1.55
Sdc2P43407 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc2P43407 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc2P43407 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Sdc2P43407 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sdc2P43407 Gm15745-201ENSMUST00000119807 115 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Gm25293-201ENSMUST00000122792 285 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.34□□□□□ -1.55
Sdc2P43407 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc2P43407 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.34□□□□□ -1.55
Sdc2P43407 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc2P43407 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc2P43407 Gm23673-201ENSMUST00000157474 298 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Gm26211-201ENSMUST00000158578 129 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc2P43407 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc2P43407 Gm3307-201ENSMUST00000176164 632 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Gm24949-201ENSMUST00000183609 215 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Mir7008-201ENSMUST00000184398 63 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc2P43407 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.34□□□□□ -1.55
Sdc2P43407 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 AC159622.1-201ENSMUST00000221004 554 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 AV026068-237ENSMUST00000226075 572 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sdc2P43407 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sdc2P43407 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sdc2P43407 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sdc2P43407 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc2P43407 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.34□□□□□ -1.55
Sdc2P43407 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sdc2P43407 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.56
Sdc2P43407 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sdc2P43407 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sdc2P43407 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sdc2P43407 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sdc2P43407 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.34□□□□□ -1.56
Sdc2P43407 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.34□□□□□ -1.56
Sdc2P43407 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Sdc2P43407 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.34□□□□□ -1.56
Sdc2P43407 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.34□□□□□ -1.56
Sdc2P43407 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sdc2P43407 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sdc2P43407 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc2P43407 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc2P43407 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc2P43407 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sdc2P43407 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Gm14909-201ENSMUST00000117853 351 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Gm15022-201ENSMUST00000122074 746 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc2P43407 Gm16260-201ENSMUST00000155141 304 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc2P43407 Gm20545-201ENSMUST00000174739 210 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Gm8321-201ENSMUST00000181691 980 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Mir6343-201ENSMUST00000183584 84 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Gm8891-201ENSMUST00000198546 832 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Gm43136-201ENSMUST00000200403 636 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Gm2011-203ENSMUST00000203750 435 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Gm7825-201ENSMUST00000204046 416 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Gm44779-201ENSMUST00000206937 708 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc2P43407 Gm19256-201ENSMUST00000218550 231 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc2P43407 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Mir412-201ENSMUST00000083636 80 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc2P43407 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sdc2P43407 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sdc2P43407 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc2P43407 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc2P43407 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sdc2P43407 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.33□□□□□ -1.56
Sdc2P43407 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sdc2P43407 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Sdc2P43407 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc2P43407 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc2P43407 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc2P43407 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc2P43407 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc2P43407 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc2P43407 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc2P43407 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc2P43407 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc2P43407 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sdc2P43407 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sdc2P43407 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms