Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC7.12□□□□□ -1.27
Col18a1P39061 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 AC190403.1-201ENSMUST00000224515 1325 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm44801-201ENSMUST00000207644 2060 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm25419-201ENSMUST00000104215 191 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm16428-201ENSMUST00000121193 723 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm16458-201ENSMUST00000121428 502 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm25292-201ENSMUST00000122797 322 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm26468-201ENSMUST00000158644 106 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm2966-201ENSMUST00000166052 481 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm17204-201ENSMUST00000167936 478 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm28637-201ENSMUST00000179424 345 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm27492-201ENSMUST00000185194 187 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm29413-201ENSMUST00000186019 880 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm28597-201ENSMUST00000187664 666 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm29639-201ENSMUST00000188375 580 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm28337-201ENSMUST00000190425 666 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 AC140393.2-201ENSMUST00000226894 943 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 AC137961.1-201ENSMUST00000227924 734 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Col18a1P39061 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Col18a1P39061 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Col18a1P39061 Gm23928-201ENSMUST00000082469 145 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC7.12□□□□□ -1.27
Col18a1P39061 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col18a1P39061 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col18a1P39061 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col18a1P39061 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Col18a1P39061 AC168056.3-201ENSMUST00000225395 2540 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col18a1P39061 Gm14304-201ENSMUST00000117272 446 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm15176-201ENSMUST00000117734 135 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm14677-201ENSMUST00000117866 486 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm11904-201ENSMUST00000120562 248 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.11□□□□□ -1.27
Col18a1P39061 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC7.11□□□□□ -1.27
Col18a1P39061 Gm23501-201ENSMUST00000157744 256 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm15796-201ENSMUST00000162135 204 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm21070-201ENSMUST00000182425 985 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col18a1P39061 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col18a1P39061 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC7.11□□□□□ -1.27
Col18a1P39061 Gm5734-201ENSMUST00000189787 913 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm28211-201ENSMUST00000190920 315 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC7.11□□□□□ -1.27
Col18a1P39061 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC7.11□□□□□ -1.27
Col18a1P39061 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC7.11□□□□□ -1.27
Col18a1P39061 Gm5285-201ENSMUST00000193089 666 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm43157-201ENSMUST00000198223 412 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm44108-201ENSMUST00000203525 422 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 AC166902.1-201ENSMUST00000216653 517 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 AC131085.1-201ENSMUST00000224746 656 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Col18a1P39061 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Col18a1P39061 Gm23686-201ENSMUST00000083241 164 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm23875-201ENSMUST00000083711 318 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col18a1P39061 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC7.11□□□□□ -1.27
Col18a1P39061 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col18a1P39061 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Col18a1P39061 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Col18a1P39061 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col18a1P39061 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Col18a1P39061 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col18a1P39061 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col18a1P39061 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm12225-201ENSMUST00000117995 298 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm15333-201ENSMUST00000118825 364 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm11891-201ENSMUST00000121241 619 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC7.1□□□□□ -1.27
Col18a1P39061 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms