Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm43148-201ENSMUST00000198237 520 ntBASIC5.66□□□□□ -1.5
LdlrP35951 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.66□□□□□ -1.5
LdlrP35951 Gm18414-201ENSMUST00000210858 694 ntBASIC5.66□□□□□ -1.5
LdlrP35951 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.66□□□□□ -1.5
LdlrP35951 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LdlrP35951 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.66□□□□□ -1.5
LdlrP35951 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.66□□□□□ -1.5
LdlrP35951 AC121844.1-201ENSMUST00000218706 137 ntBASIC5.66□□□□□ -1.5
LdlrP35951 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.66□□□□□ -1.5
LdlrP35951 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.66□□□□□ -1.5
LdlrP35951 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.66□□□□□ -1.5
LdlrP35951 CT485612.3-201ENSMUST00000222179 408 ntBASIC5.66□□□□□ -1.5
LdlrP35951 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.66□□□□□ -1.5
LdlrP35951 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.66□□□□□ -1.5
LdlrP35951 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.66□□□□□ -1.5
LdlrP35951 AC129208.2-201ENSMUST00000228506 320 ntBASIC5.66□□□□□ -1.5
LdlrP35951 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.66□□□□□ -1.5
LdlrP35951 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LdlrP35951 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.66□□□□□ -1.5
LdlrP35951 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
LdlrP35951 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LdlrP35951 Gm25005-201ENSMUST00000083812 156 ntBASIC5.66□□□□□ -1.5
LdlrP35951 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.66□□□□□ -1.5
LdlrP35951 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LdlrP35951 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LdlrP35951 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LdlrP35951 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.66□□□□□ -1.5
LdlrP35951 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.66□□□□□ -1.5
LdlrP35951 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LdlrP35951 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.66□□□□□ -1.5
LdlrP35951 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
LdlrP35951 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LdlrP35951 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LdlrP35951 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.66□□□□□ -1.5
LdlrP35951 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.66□□□□□ -1.5
LdlrP35951 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
LdlrP35951 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
LdlrP35951 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LdlrP35951 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LdlrP35951 AC153881.3-201ENSMUST00000218494 1561 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm25422-201ENSMUST00000104219 129 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm25345-201ENSMUST00000104505 133 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LdlrP35951 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm11746-201ENSMUST00000119843 821 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm14898-201ENSMUST00000120202 645 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm14679-201ENSMUST00000121536 722 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.65□□□□□ -1.5
LdlrP35951 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LdlrP35951 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.65□□□□□ -1.5
LdlrP35951 Gm6808-201ENSMUST00000162341 807 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm17194-201ENSMUST00000164610 348 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.65□□□□□ -1.5
LdlrP35951 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm5473-201ENSMUST00000179326 642 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm21241-201ENSMUST00000179551 934 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm29600-201ENSMUST00000188687 377 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm38040-201ENSMUST00000193505 225 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC5.65□□□□□ -1.5
LdlrP35951 Gm18877-201ENSMUST00000207706 539 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm31166-201ENSMUST00000209326 288 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC5.65□□□□□ -1.5
LdlrP35951 LOC665443-201ENSMUST00000212284 796 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.65□□□□□ -1.5
LdlrP35951 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LdlrP35951 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.65□□□□□ -1.5
LdlrP35951 AC158981.3-202ENSMUST00000228906 523 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LdlrP35951 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LdlrP35951 Gm7808-201ENSMUST00000082002 387 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Mir465-201ENSMUST00000093563 74 ntBASIC5.65□□□□□ -1.5
LdlrP35951 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LdlrP35951 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LdlrP35951 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.65□□□□□ -1.51
LdlrP35951 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
LdlrP35951 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
LdlrP35951 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
LdlrP35951 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LdlrP35951 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.65□□□□□ -1.51
LdlrP35951 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.65□□□□□ -1.51
LdlrP35951 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.64□□□□□ -1.51
LdlrP35951 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LdlrP35951 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LdlrP35951 Mir669d-2-201ENSMUST00000116854 86 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm13311-201ENSMUST00000117863 379 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm12889-201ENSMUST00000118684 241 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
LdlrP35951 Gm13080-201ENSMUST00000120556 420 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm12222-201ENSMUST00000121368 260 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm12488-201ENSMUST00000122449 499 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm23050-201ENSMUST00000158775 165 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms