Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp4P35123 Gm18181-201ENSMUST00000190670 736 ntBASIC6.09□□□□□ -1.43
Usp4P35123 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.09□□□□□ -1.43
Usp4P35123 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC6.09□□□□□ -1.43
Usp4P35123 Gm42502-201ENSMUST00000198550 1089 ntBASIC6.09□□□□□ -1.43
Usp4P35123 Gm8999-201ENSMUST00000204951 969 ntBASIC6.09□□□□□ -1.43
Usp4P35123 Gm45082-201ENSMUST00000206082 601 ntBASIC6.09□□□□□ -1.43
Usp4P35123 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp4P35123 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.09□□□□□ -1.43
Usp4P35123 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.09□□□□□ -1.43
Usp4P35123 AC156952.1-201ENSMUST00000220361 793 ntBASIC6.09□□□□□ -1.43
Usp4P35123 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.09□□□□□ -1.43
Usp4P35123 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp4P35123 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp4P35123 AC130823.2-201ENSMUST00000226169 290 ntBASIC6.09□□□□□ -1.43
Usp4P35123 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.09□□□□□ -1.43
Usp4P35123 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp4P35123 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Usp4P35123 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp4P35123 Gm24041-201ENSMUST00000083115 156 ntBASIC6.09□□□□□ -1.43
Usp4P35123 n-R5s86-201ENSMUST00000083215 119 ntBASIC6.09□□□□□ -1.43
Usp4P35123 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Usp4P35123 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp4P35123 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Usp4P35123 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Usp4P35123 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp4P35123 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp4P35123 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp4P35123 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Usp4P35123 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Usp4P35123 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.09□□□□□ -1.44
Usp4P35123 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Usp4P35123 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Usp4P35123 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Usp4P35123 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.09□□□□□ -1.44
Usp4P35123 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 Gm25848-201ENSMUST00000116790 144 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm13770-201ENSMUST00000117149 305 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm11369-201ENSMUST00000120812 318 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm14695-201ENSMUST00000121721 282 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.08□□□□□ -1.44
Usp4P35123 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 Gm24395-201ENSMUST00000158139 125 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm22361-201ENSMUST00000158435 176 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm23205-201ENSMUST00000158671 103 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm23505-201ENSMUST00000158989 130 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm3339-201ENSMUST00000163462 475 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm7952-201ENSMUST00000180540 984 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm26970-201ENSMUST00000182990 964 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Mir7020-201ENSMUST00000183787 70 ntBASIC6.08□□□□□ -1.44
Usp4P35123 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC6.08□□□□□ -1.44
Usp4P35123 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Gm21803-201ENSMUST00000188897 693 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Gm28567-201ENSMUST00000190270 693 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Gm28211-201ENSMUST00000190920 315 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm28927-201ENSMUST00000191528 272 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm37771-201ENSMUST00000193121 265 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm37784-201ENSMUST00000193233 189 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm37044-201ENSMUST00000193531 693 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm38369-201ENSMUST00000195101 693 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm4332-201ENSMUST00000196114 346 ntBASIC6.08□□□□□ -1.44
Usp4P35123 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 Gm31861-201ENSMUST00000204563 672 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.08□□□□□ -1.44
Usp4P35123 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.08□□□□□ -1.44
Usp4P35123 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp4P35123 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.08□□□□□ -1.44
Usp4P35123 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.08□□□□□ -1.44
Usp4P35123 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms