Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.37□□□□□ -1.55
Hoxc11P31313 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hoxc11P31313 Gm24319-201ENSMUST00000083389 107 ntBASIC5.37□□□□□ -1.55
Hoxc11P31313 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hoxc11P31313 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hoxc11P31313 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.37□□□□□ -1.55
Hoxc11P31313 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Hoxc11P31313 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxc11P31313 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxc11P31313 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Hoxc11P31313 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Hoxc11P31313 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Hoxc11P31313 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxc11P31313 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxc11P31313 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxc11P31313 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm22194-201ENSMUST00000116869 95 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm12073-201ENSMUST00000117382 524 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm11447-201ENSMUST00000118983 858 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm6175-201ENSMUST00000121351 400 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm25824-201ENSMUST00000157092 121 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Mir6539-201ENSMUST00000183732 110 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Mir6417-201ENSMUST00000183815 116 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm18406-201ENSMUST00000185872 669 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm28567-201ENSMUST00000190270 693 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm29454-201ENSMUST00000190805 393 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm37503-201ENSMUST00000192088 319 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm37044-201ENSMUST00000193531 693 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm38369-201ENSMUST00000195101 693 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm44392-201ENSMUST00000196758 115 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm43315-201ENSMUST00000198120 313 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm45710-201ENSMUST00000212847 215 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 AC160970.1-201ENSMUST00000219311 475 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm8672-201ENSMUST00000221200 332 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm7045-201ENSMUST00000221466 605 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 AV026068-231ENSMUST00000225862 482 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Snord59a-201ENSMUST00000082844 74 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.36□□□□□ -1.55
Hoxc11P31313 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hoxc11P31313 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Hoxc11P31313 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.35□□□□□ -1.55
Hoxc11P31313 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.35□□□□□ -1.55
Hoxc11P31313 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Hoxc11P31313 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.35□□□□□ -1.55
Hoxc11P31313 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Hoxc11P31313 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Hoxc11P31313 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Hoxc11P31313 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hoxc11P31313 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.35□□□□□ -1.55
Hoxc11P31313 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Hoxc11P31313 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Hoxc11P31313 Gm16007-201ENSMUST00000117837 286 ntBASIC5.35□□□□□ -1.55
Hoxc11P31313 Gm13681-201ENSMUST00000117925 210 ntBASIC5.35□□□□□ -1.55
Hoxc11P31313 Gm12587-201ENSMUST00000120180 427 ntBASIC5.35□□□□□ -1.55
Hoxc11P31313 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hoxc11P31313 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hoxc11P31313 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms