Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm4557-201ENSMUST00000185826 907 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Gm4526-201ENSMUST00000186039 920 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col2a1P28481 Gm8708-201ENSMUST00000188500 906 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Gm37961-201ENSMUST00000192729 299 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Gm44402-201ENSMUST00000203677 238 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.61□□□□□ -1.51
Col2a1P28481 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Gm4574-201ENSMUST00000207804 542 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col2a1P28481 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col2a1P28481 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col2a1P28481 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.61□□□□□ -1.51
Col2a1P28481 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.61□□□□□ -1.51
Col2a1P28481 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col2a1P28481 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col2a1P28481 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col2a1P28481 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col2a1P28481 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col2a1P28481 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col2a1P28481 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Col2a1P28481 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col2a1P28481 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Gm11313-201ENSMUST00000118779 432 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Gm11625-201ENSMUST00000119535 296 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Gm12813-201ENSMUST00000119615 902 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col2a1P28481 Gm23046-201ENSMUST00000158369 284 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col2a1P28481 Gm21856-201ENSMUST00000187547 696 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.6□□□□□ -1.51
Col2a1P28481 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Col2a1P28481 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.6□□□□□ -1.51
Col2a1P28481 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.6□□□□□ -1.51
Col2a1P28481 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col2a1P28481 Gm46327-201ENSMUST00000218240 365 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col2a1P28481 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col2a1P28481 Olfr881-201ENSMUST00000074611 948 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Mir346-201ENSMUST00000083547 98 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Gm22350-201ENSMUST00000083924 156 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col2a1P28481 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col2a1P28481 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col2a1P28481 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col2a1P28481 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col2a1P28481 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col2a1P28481 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col2a1P28481 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col2a1P28481 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col2a1P28481 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col2a1P28481 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col2a1P28481 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Col2a1P28481 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col2a1P28481 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.6□□□□□ -1.51
Col2a1P28481 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col2a1P28481 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Col2a1P28481 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.59□□□□□ -1.51
Col2a1P28481 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.59□□□□□ -1.51
Col2a1P28481 Gm13132-201ENSMUST00000121194 472 ntBASIC5.59□□□□□ -1.51
Col2a1P28481 Gm16571-201ENSMUST00000159112 291 ntBASIC5.59□□□□□ -1.51
Col2a1P28481 Mir6907-201ENSMUST00000183764 71 ntBASIC5.59□□□□□ -1.51
Col2a1P28481 Mir6933-201ENSMUST00000184982 81 ntBASIC5.59□□□□□ -1.51
Col2a1P28481 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col2a1P28481 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col2a1P28481 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col2a1P28481 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.59□□□□□ -1.51
Col2a1P28481 Gm3912-203ENSMUST00000211024 367 ntBASIC5.59□□□□□ -1.51
Col2a1P28481 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.59□□□□□ -1.51
Col2a1P28481 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.59□□□□□ -1.51
Col2a1P28481 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.59□□□□□ -1.51
Col2a1P28481 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col2a1P28481 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col2a1P28481 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col2a1P28481 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.59□□□□□ -1.51
Col2a1P28481 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col2a1P28481 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.59□□□□□ -1.51
Col2a1P28481 Gm42996-201ENSMUST00000196116 1636 ntBASIC5.59□□□□□ -1.51
Col2a1P28481 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col2a1P28481 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col2a1P28481 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col2a1P28481 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.59□□□□□ -1.52
Col2a1P28481 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col2a1P28481 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Col2a1P28481 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms