Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
P20040 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.51□□□□□ -1.69
P20040 Gm11197-201ENSMUST00000145158 839 ntBASIC4.51□□□□□ -1.69
P20040 Gm23121-201ENSMUST00000157653 173 ntBASIC4.51□□□□□ -1.69
P20040 Gm25669-201ENSMUST00000157699 112 ntBASIC4.51□□□□□ -1.69
P20040 Gm8256-201ENSMUST00000169178 453 ntBASIC4.51□□□□□ -1.69
P20040 Gm4831-201ENSMUST00000174626 594 ntBASIC4.51□□□□□ -1.69
P20040 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
P20040 Gm19002-201ENSMUST00000192649 1012 ntBASIC4.51□□□□□ -1.69
P20040 Gm37882-201ENSMUST00000195254 196 ntBASIC4.51□□□□□ -1.69
P20040 Gm37445-201ENSMUST00000195318 242 ntBASIC4.51□□□□□ -1.69
P20040 Gm42437-201ENSMUST00000197263 923 ntBASIC4.51□□□□□ -1.69
P20040 Gm43717-201ENSMUST00000198684 310 ntBASIC4.51□□□□□ -1.69
P20040 Gm6366-201ENSMUST00000198766 826 ntBASIC4.51□□□□□ -1.69
P20040 Gm45215-201ENSMUST00000206407 395 ntBASIC4.51□□□□□ -1.69
P20040 Gm45574-201ENSMUST00000210921 331 ntBASIC4.51□□□□□ -1.69
P20040 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.51□□□□□ -1.69
P20040 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.51□□□□□ -1.69
P20040 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.51□□□□□ -1.69
P20040 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
P20040 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC4.51□□□□□ -1.69
P20040 Gm25139-201ENSMUST00000083247 210 ntBASIC4.51□□□□□ -1.69
P20040 Olfr878-201ENSMUST00000086061 1065 ntBASIC4.51□□□□□ -1.69
P20040 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
P20040 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.51□□□□□ -1.69
P20040 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
P20040 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.51□□□□□ -1.69
P20040 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.51□□□□□ -1.69
P20040 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
P20040 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.51□□□□□ -1.69
P20040 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
P20040 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
P20040 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
P20040 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
P20040 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.5□□□□□ -1.69
P20040 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.5□□□□□ -1.69
P20040 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.5□□□□□ -1.69
P20040 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
P20040 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
P20040 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
P20040 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
P20040 Gm22266-201ENSMUST00000104011 138 ntBASIC4.5□□□□□ -1.69
P20040 Gm15012-201ENSMUST00000119176 106 ntBASIC4.5□□□□□ -1.69
P20040 Gm12820-201ENSMUST00000119233 342 ntBASIC4.5□□□□□ -1.69
P20040 Gm14619-201ENSMUST00000120480 168 ntBASIC4.5□□□□□ -1.69
P20040 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.5□□□□□ -1.69
P20040 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
P20040 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
P20040 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
P20040 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.5□□□□□ -1.69
P20040 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.5□□□□□ -1.69
P20040 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.5□□□□□ -1.69
P20040 Gm22923-201ENSMUST00000174952 110 ntBASIC4.5□□□□□ -1.69
P20040 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
P20040 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
P20040 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.5□□□□□ -1.69
P20040 Gm18717-201ENSMUST00000192744 1241 ntBASIC4.5□□□□□ -1.69
P20040 Gm36638-201ENSMUST00000193295 400 ntBASIC4.5□□□□□ -1.69
P20040 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.5□□□□□ -1.69
P20040 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
P20040 Gm17984-201ENSMUST00000205286 859 ntBASIC4.5□□□□□ -1.69
P20040 Gm45908-201ENSMUST00000212977 1177 ntBASIC4.5□□□□□ -1.69
P20040 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.5□□□□□ -1.69
P20040 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.5□□□□□ -1.69
P20040 AC132260.2-201ENSMUST00000224482 344 ntBASIC4.5□□□□□ -1.69
P20040 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.5□□□□□ -1.69
P20040 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.5□□□□□ -1.69
P20040 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.5□□□□□ -1.69
P20040 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
P20040 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.5□□□□□ -1.69
P20040 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
P20040 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
P20040 Gm23508-201ENSMUST00000083079 72 ntBASIC4.5□□□□□ -1.69
P20040 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
P20040 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
P20040 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
P20040 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
P20040 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
P20040 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
P20040 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
P20040 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.5□□□□□ -1.69
P20040 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
P20040 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
P20040 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.49□□□□□ -1.69
P20040 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.49□□□□□ -1.69
P20040 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
P20040 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.49□□□□□ -1.69
P20040 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
P20040 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
P20040 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms