Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.28□□□□□ -1.72
Cdx1P18111 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm15233-201ENSMUST00000118747 400 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm14783-201ENSMUST00000118900 663 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm15780-201ENSMUST00000121283 935 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm2182-201ENSMUST00000145243 663 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Gm25150-201ENSMUST00000157121 60 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm22916-201ENSMUST00000157616 119 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cdx1P18111 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.28□□□□□ -1.72
Cdx1P18111 Gm3496-201ENSMUST00000188283 745 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm28116-201ENSMUST00000189064 387 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm42625-201ENSMUST00000198611 922 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm43222-201ENSMUST00000199013 603 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm43054-201ENSMUST00000199495 884 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Mir219c-201ENSMUST00000199860 60 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm43036-201ENSMUST00000200594 373 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm42961-201ENSMUST00000202023 181 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Gm17999-201ENSMUST00000211568 542 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.28□□□□□ -1.72
Cdx1P18111 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 AC124826.1-201ENSMUST00000221651 325 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 AC164302.1-201ENSMUST00000227036 433 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm5045-201ENSMUST00000027054 810 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cdx1P18111 Gm8412-201ENSMUST00000077493 440 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cdx1P18111 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cdx1P18111 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Gm43210-201ENSMUST00000196743 6152 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Gm38387-201ENSMUST00000191945 2577 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cdx1P18111 Gm42662-201ENSMUST00000202539 1431 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
Cdx1P18111 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Cdx1P18111 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Gm13770-201ENSMUST00000117149 305 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm7927-201ENSMUST00000118818 880 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm13333-201ENSMUST00000119424 781 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm14861-201ENSMUST00000119451 455 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm14521-201ENSMUST00000119545 350 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm15166-201ENSMUST00000120790 385 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm12413-201ENSMUST00000121508 312 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm13531-201ENSMUST00000121893 543 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm12650-201ENSMUST00000121966 258 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cdx1P18111 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC4.27□□□□□ -1.73
Cdx1P18111 Gm6872-201ENSMUST00000165001 700 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm23633-201ENSMUST00000175293 119 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm2877-201ENSMUST00000178248 1204 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm8324-201ENSMUST00000178911 1204 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cdx1P18111 Gm27864-201ENSMUST00000183704 190 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm18407-201ENSMUST00000192126 790 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm37681-201ENSMUST00000193880 727 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Mir6516-201ENSMUST00000196236 110 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Gm44494-201ENSMUST00000196760 129 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.27□□□□□ -1.73
Cdx1P18111 Gm43148-201ENSMUST00000198237 520 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.27□□□□□ -1.73
Cdx1P18111 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms