Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm44820-201ENSMUST00000207420 396 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm18924-201ENSMUST00000211929 316 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm26330-201ENSMUST00000082817 104 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Mir20a-201ENSMUST00000083508 107 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm14046-201ENSMUST00000119389 509 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm12808-201ENSMUST00000120597 404 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm13484-201ENSMUST00000120738 412 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm6673-201ENSMUST00000166114 700 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm43408-201ENSMUST00000198263 440 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm18011-201ENSMUST00000203717 565 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm6261-201ENSMUST00000204707 760 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm22741-201ENSMUST00000083438 165 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chmp6P0C0A3 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gm14086-201ENSMUST00000117152 173 ntBASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gm11742-201ENSMUST00000119903 233 ntBASIC5.42□□□□□ -1.54
Chmp6P0C0A3 n-R5s30-201ENSMUST00000122624 122 ntBASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gm6542-201ENSMUST00000153606 772 ntBASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gm7721-201ENSMUST00000200446 546 ntBASIC5.42□□□□□ -1.54
Chmp6P0C0A3 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gm2099-201ENSMUST00000220979 412 ntBASIC5.42□□□□□ -1.54
Chmp6P0C0A3 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms