Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.28□□□□□ -1.56
TnfP06804 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.28□□□□□ -1.56
TnfP06804 Gm5045-201ENSMUST00000027054 810 ntBASIC5.28□□□□□ -1.56
TnfP06804 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.28□□□□□ -1.56
TnfP06804 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.28□□□□□ -1.56
TnfP06804 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TnfP06804 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.28□□□□□ -1.56
TnfP06804 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TnfP06804 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TnfP06804 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.27□□□□□ -1.57
TnfP06804 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.27□□□□□ -1.57
TnfP06804 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.27□□□□□ -1.57
TnfP06804 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
TnfP06804 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TnfP06804 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
TnfP06804 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.27□□□□□ -1.57
TnfP06804 Gm12752-201ENSMUST00000121657 811 ntBASIC5.27□□□□□ -1.57
TnfP06804 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TnfP06804 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TnfP06804 Gm25534-201ENSMUST00000175365 125 ntBASIC5.27□□□□□ -1.57
TnfP06804 Gm20561-201ENSMUST00000188131 292 ntBASIC5.27□□□□□ -1.57
TnfP06804 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TnfP06804 Gm29036-201ENSMUST00000189967 877 ntBASIC5.27□□□□□ -1.57
TnfP06804 Gm28567-201ENSMUST00000190270 693 ntBASIC5.27□□□□□ -1.57
TnfP06804 Gm37044-201ENSMUST00000193531 693 ntBASIC5.27□□□□□ -1.57
TnfP06804 Gm38369-201ENSMUST00000195101 693 ntBASIC5.27□□□□□ -1.57
TnfP06804 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.27□□□□□ -1.57
TnfP06804 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.27□□□□□ -1.57
TnfP06804 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.27□□□□□ -1.57
TnfP06804 AV026068-220ENSMUST00000224153 1147 ntBASIC5.27□□□□□ -1.57
TnfP06804 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TnfP06804 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TnfP06804 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TnfP06804 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.27□□□□□ -1.57
TnfP06804 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
TnfP06804 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
TnfP06804 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.27□□□□□ -1.57
TnfP06804 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
TnfP06804 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TnfP06804 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
TnfP06804 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.26□□□□□ -1.57
TnfP06804 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TnfP06804 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TnfP06804 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.26□□□□□ -1.57
TnfP06804 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.26□□□□□ -1.57
TnfP06804 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TnfP06804 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TnfP06804 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TnfP06804 Gm24628-201ENSMUST00000122761 289 ntBASIC5.26□□□□□ -1.57
TnfP06804 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TnfP06804 Gm27762-201ENSMUST00000183417 109 ntBASIC5.26□□□□□ -1.57
TnfP06804 Gm18802-201ENSMUST00000186270 888 ntBASIC5.26□□□□□ -1.57
TnfP06804 Gm8480-201ENSMUST00000190350 698 ntBASIC5.26□□□□□ -1.57
TnfP06804 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.26□□□□□ -1.57
TnfP06804 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.26□□□□□ -1.57
TnfP06804 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.26□□□□□ -1.57
TnfP06804 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.26□□□□□ -1.57
TnfP06804 Gm42452-201ENSMUST00000199749 617 ntBASIC5.26□□□□□ -1.57
TnfP06804 Gm32308-201ENSMUST00000203053 280 ntBASIC5.26□□□□□ -1.57
TnfP06804 Gm3148-201ENSMUST00000203594 612 ntBASIC5.26□□□□□ -1.57
TnfP06804 Gm18791-201ENSMUST00000204611 726 ntBASIC5.26□□□□□ -1.57
TnfP06804 Gm4290-201ENSMUST00000206897 814 ntBASIC5.26□□□□□ -1.57
TnfP06804 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.26□□□□□ -1.57
TnfP06804 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.26□□□□□ -1.57
TnfP06804 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.26□□□□□ -1.57
TnfP06804 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.26□□□□□ -1.57
TnfP06804 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.26□□□□□ -1.57
TnfP06804 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.26□□□□□ -1.57
TnfP06804 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TnfP06804 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TnfP06804 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
TnfP06804 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
TnfP06804 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TnfP06804 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.26□□□□□ -1.57
TnfP06804 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.26□□□□□ -1.57
TnfP06804 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.26□□□□□ -1.57
TnfP06804 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.26□□□□□ -1.57
TnfP06804 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TnfP06804 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TnfP06804 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.26□□□□□ -1.57
TnfP06804 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.26□□□□□ -1.57
TnfP06804 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TnfP06804 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TnfP06804 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TnfP06804 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TnfP06804 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.25□□□□□ -1.57
TnfP06804 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TnfP06804 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TnfP06804 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TnfP06804 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TnfP06804 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TnfP06804 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms