Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm15779-201ENSMUST00000117470 412 ntBASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm12717-201ENSMUST00000118427 983 ntBASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm15772-201ENSMUST00000118533 438 ntBASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm11313-201ENSMUST00000118779 432 ntBASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm13867-201ENSMUST00000120844 395 ntBASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Mir6960-201ENSMUST00000183449 61 ntBASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm44518-201ENSMUST00000208080 4370 ntBASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Gm38368-201ENSMUST00000193181 1335 ntBASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Gm12231-201ENSMUST00000119447 695 ntBASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Gm15034-201ENSMUST00000120043 349 ntBASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Gm6647-201ENSMUST00000170514 641 ntBASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Gm28685-201ENSMUST00000187545 1101 ntBASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Gm8861-201ENSMUST00000196346 832 ntBASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 AC161252.2-201ENSMUST00000224978 374 ntBASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 AC121137.1-201ENSMUST00000225272 602 ntBASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Gm7808-201ENSMUST00000082002 387 ntBASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Gm44171-201ENSMUST00000203701 2109 ntBASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccdc180J3QNE4 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm37611-201ENSMUST00000195250 2028 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm11914-201ENSMUST00000117094 507 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm7312-201ENSMUST00000118798 469 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm5558-201ENSMUST00000178933 495 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Mir6344-201ENSMUST00000183462 104 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm19124-201ENSMUST00000191041 832 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm43968-201ENSMUST00000203388 389 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm29781-201ENSMUST00000203862 478 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 AC140930.4-201ENSMUST00000220750 150 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm37509-201ENSMUST00000194867 3169 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Snord66-201ENSMUST00000104051 75 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm12807-201ENSMUST00000121546 962 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm18426-201ENSMUST00000191874 973 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm2522-201ENSMUST00000204280 322 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm7368-201ENSMUST00000213307 367 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Gm26330-201ENSMUST00000082817 104 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 n-R5s168-201ENSMUST00000083948 104 ntBASIC9.04□□□□□ -0.96
Ccdc180J3QNE4 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Gm24689-201ENSMUST00000157760 104 ntBASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Gm29196-201ENSMUST00000189239 618 ntBASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc180J3QNE4 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
Ccdc180J3QNE4 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Ccdc180J3QNE4 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Ccdc180J3QNE4 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc180J3QNE4 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc180J3QNE4 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccdc180J3QNE4 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms