Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.47□□□□□ -1.53
Scn3aA2ASI5 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm24507-201ENSMUST00000157683 134 ntBASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm5558-201ENSMUST00000178933 495 ntBASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Mir6943-201ENSMUST00000185186 66 ntBASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm18258-201ENSMUST00000210413 542 ntBASIC5.46□□□□□ -1.53
Scn3aA2ASI5 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.46□□□□□ -1.53
Scn3aA2ASI5 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm23300-201ENSMUST00000082712 125 ntBASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.46□□□□□ -1.53
Scn3aA2ASI5 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm25595-201ENSMUST00000102273 97 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm24124-201ENSMUST00000104103 132 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm14878-201ENSMUST00000118167 293 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm15206-201ENSMUST00000119143 454 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm24477-201ENSMUST00000157438 103 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm25861-201ENSMUST00000158251 109 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm25605-201ENSMUST00000158364 124 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm18128-201ENSMUST00000172625 511 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm26828-201ENSMUST00000180640 172 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Gm45857-201ENSMUST00000212207 356 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scn3aA2ASI5 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Gm25278-201ENSMUST00000157267 120 ntBASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Gm24689-201ENSMUST00000157760 104 ntBASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Gm22940-201ENSMUST00000158560 155 ntBASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Gm29138-201ENSMUST00000191444 348 ntBASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Olfr881-201ENSMUST00000074611 948 ntBASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn3aA2ASI5 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm4557-201ENSMUST00000185826 907 ntBASIC5.44□□□□□ -1.54
Scn3aA2ASI5 Gm4526-201ENSMUST00000186039 920 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms