Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.05■□□□□ 0.16
H2afb1S4R1E0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb1S4R1E0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Gm42642-201ENSMUST00000200683 355 ntBASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
H2afb1S4R1E0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afb1S4R1E0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afb1S4R1E0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
H2afb1S4R1E0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
H2afb1S4R1E0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
H2afb1S4R1E0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2afb1S4R1E0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
H2afb1S4R1E0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.02■□□□□ 0.15
H2afb1S4R1E0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
H2afb1S4R1E0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
H2afb1S4R1E0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Gm10033-202ENSMUST00000211874 928 ntBASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms