Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Gm13158-201ENSMUST00000122007 736 ntBASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Gm10698-201ENSMUST00000182663 604 ntBASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl40Q9Z2Q5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Gm15378-201ENSMUST00000121894 207 ntBASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl40Q9Z2Q5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl40Q9Z2Q5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Mrpl40Q9Z2Q5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Flg-201ENSMUST00000050758 1488 ntBASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl40Q9Z2Q5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mrpl40Q9Z2Q5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mrpl40Q9Z2Q5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Mrpl40Q9Z2Q5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mrpl40Q9Z2Q5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.63■□□□□ 0.41
Mrpl40Q9Z2Q5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mrpl40Q9Z2Q5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mrpl40Q9Z2Q5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.63■□□□□ 0.41
Mrpl40Q9Z2Q5 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.63■□□□□ 0.41
Mrpl40Q9Z2Q5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms