Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lgr5Q9Z1P4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Lgr5Q9Z1P4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lgr5Q9Z1P4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Lgr5Q9Z1P4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.28■■□□□ 1
Lgr5Q9Z1P4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lgr5Q9Z1P4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Gm9103-201ENSMUST00000119371 405 ntBASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lgr5Q9Z1P4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Lgr5Q9Z1P4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lgr5Q9Z1P4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lgr5Q9Z1P4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lgr5Q9Z1P4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lgr5Q9Z1P4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lgr5Q9Z1P4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Gm7284-201ENSMUST00000131667 944 ntBASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Il3ra-202ENSMUST00000223589 738 ntBASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lgr5Q9Z1P4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lgr5Q9Z1P4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lgr5Q9Z1P4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Lgr5Q9Z1P4 Gm13474-201ENSMUST00000122466 815 ntBASIC21.25■□□□□ 0.99
Lgr5Q9Z1P4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lgr5Q9Z1P4 Gm9731-201ENSMUST00000209480 747 ntBASIC21.25■□□□□ 0.99
Lgr5Q9Z1P4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lgr5Q9Z1P4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Gm25016-201ENSMUST00000158399 131 ntBASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Mir1668-201ENSMUST00000184114 107 ntBASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Gm10566-201ENSMUST00000086739 996 ntBASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Lgr5Q9Z1P4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lgr5Q9Z1P4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Lgr5Q9Z1P4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lgr5Q9Z1P4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lgr5Q9Z1P4 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.23■□□□□ 0.99
Lgr5Q9Z1P4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Lgr5Q9Z1P4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Lgr5Q9Z1P4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lgr5Q9Z1P4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lgr5Q9Z1P4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Lgr5Q9Z1P4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lgr5Q9Z1P4 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.22■□□□□ 0.99
Lgr5Q9Z1P4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lgr5Q9Z1P4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.22■□□□□ 0.99
Lgr5Q9Z1P4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.22■□□□□ 0.99
Lgr5Q9Z1P4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Lgr5Q9Z1P4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.22■□□□□ 0.99
Lgr5Q9Z1P4 Gm5587-201ENSMUST00000206270 674 ntBASIC21.22■□□□□ 0.99
Lgr5Q9Z1P4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lgr5Q9Z1P4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.22■□□□□ 0.99
Lgr5Q9Z1P4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lgr5Q9Z1P4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lgr5Q9Z1P4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lgr5Q9Z1P4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lgr5Q9Z1P4 Gm7213-201ENSMUST00000215977 950 ntBASIC21.21■□□□□ 0.99
Lgr5Q9Z1P4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lgr5Q9Z1P4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lgr5Q9Z1P4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lgr5Q9Z1P4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lgr5Q9Z1P4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lgr5Q9Z1P4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Lgr5Q9Z1P4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lgr5Q9Z1P4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lgr5Q9Z1P4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Lgr5Q9Z1P4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lgr5Q9Z1P4 Gm14859-201ENSMUST00000117752 357 ntBASIC21.2■□□□□ 0.98
Lgr5Q9Z1P4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.2■□□□□ 0.98
Lgr5Q9Z1P4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.2■□□□□ 0.98
Lgr5Q9Z1P4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lgr5Q9Z1P4 Gm29518-201ENSMUST00000190858 372 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms