Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 Mir2861-201ENSMUST00000175539 82 ntBASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h3Q9Z0Y9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h3Q9Z0Y9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Gm27463-201ENSMUST00000183569 57 ntBASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h3Q9Z0Y9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Gm44487-201ENSMUST00000205145 325 ntBASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h3Q9Z0Y9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Gm12085-201ENSMUST00000119263 940 ntBASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Gm18959-201ENSMUST00000208954 655 ntBASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h3Q9Z0Y9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms