Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm7889-201ENSMUST00000185591 958 ntBASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcb1Q9Z0H3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcb1Q9Z0H3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcb1Q9Z0H3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Smarcb1Q9Z0H3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcb1Q9Z0H3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcb1Q9Z0H3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Gm2274-201ENSMUST00000184539 609 ntBASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcb1Q9Z0H3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Gm18959-201ENSMUST00000208954 655 ntBASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcb1Q9Z0H3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.31■□□□□ 0.52
Smarcb1Q9Z0H3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms