Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Gm15375-201ENSMUST00000119510 849 ntBASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Gm12382-201ENSMUST00000122005 922 ntBASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Gm42545-201ENSMUST00000202755 922 ntBASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Gm18032-201ENSMUST00000222541 538 ntBASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn5Q9WVD4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Gm14859-201ENSMUST00000117752 357 ntBASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.31■□□□□ 0.52
Clcn5Q9WVD4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Ank2-226ENSMUST00000189368 339 ntBASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Gm37292-201ENSMUST00000192062 758 ntBASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn5Q9WVD4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn5Q9WVD4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn5Q9WVD4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Gm45058-201ENSMUST00000205810 766 ntBASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn5Q9WVD4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms