Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CcsQ9WU84 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CcsQ9WU84 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CcsQ9WU84 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CcsQ9WU84 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CcsQ9WU84 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CcsQ9WU84 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CcsQ9WU84 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CcsQ9WU84 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CcsQ9WU84 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CcsQ9WU84 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CcsQ9WU84 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CcsQ9WU84 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CcsQ9WU84 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CcsQ9WU84 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.75□□□□□ -0.21
CcsQ9WU84 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CcsQ9WU84 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CcsQ9WU84 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.75□□□□□ -0.21
CcsQ9WU84 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CcsQ9WU84 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CcsQ9WU84 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CcsQ9WU84 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CcsQ9WU84 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CcsQ9WU84 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CcsQ9WU84 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CcsQ9WU84 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CcsQ9WU84 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CcsQ9WU84 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CcsQ9WU84 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CcsQ9WU84 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.74□□□□□ -0.21
CcsQ9WU84 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.74□□□□□ -0.21
CcsQ9WU84 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.74□□□□□ -0.21
CcsQ9WU84 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CcsQ9WU84 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.74□□□□□ -0.21
CcsQ9WU84 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CcsQ9WU84 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.74□□□□□ -0.21
CcsQ9WU84 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CcsQ9WU84 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CcsQ9WU84 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CcsQ9WU84 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CcsQ9WU84 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CcsQ9WU84 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CcsQ9WU84 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CcsQ9WU84 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.73□□□□□ -0.21
CcsQ9WU84 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CcsQ9WU84 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CcsQ9WU84 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CcsQ9WU84 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.73□□□□□ -0.21
CcsQ9WU84 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.73□□□□□ -0.21
CcsQ9WU84 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CcsQ9WU84 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.73□□□□□ -0.21
CcsQ9WU84 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CcsQ9WU84 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CcsQ9WU84 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.73□□□□□ -0.21
CcsQ9WU84 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CcsQ9WU84 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CcsQ9WU84 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.72□□□□□ -0.21
CcsQ9WU84 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CcsQ9WU84 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CcsQ9WU84 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CcsQ9WU84 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.72□□□□□ -0.21
CcsQ9WU84 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CcsQ9WU84 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CcsQ9WU84 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CcsQ9WU84 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CcsQ9WU84 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.72□□□□□ -0.21
CcsQ9WU84 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.72□□□□□ -0.21
CcsQ9WU84 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CcsQ9WU84 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CcsQ9WU84 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.72□□□□□ -0.21
CcsQ9WU84 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.72□□□□□ -0.21
CcsQ9WU84 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CcsQ9WU84 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.72□□□□□ -0.21
CcsQ9WU84 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CcsQ9WU84 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CcsQ9WU84 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.72□□□□□ -0.21
CcsQ9WU84 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.71□□□□□ -0.21
CcsQ9WU84 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CcsQ9WU84 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CcsQ9WU84 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CcsQ9WU84 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CcsQ9WU84 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CcsQ9WU84 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CcsQ9WU84 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CcsQ9WU84 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms