Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Dio3-201ENSMUST00000097228 1449 ntBASIC19.47■□□□□ 0.71
Prpf40aQ9R1C7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40aQ9R1C7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40aQ9R1C7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40aQ9R1C7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40aQ9R1C7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Gm12896-201ENSMUST00000118430 226 ntBASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Gm38285-201ENSMUST00000192928 922 ntBASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Zfp783-201ENSMUST00000095946 670 ntBASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40aQ9R1C7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.45■□□□□ 0.7
Prpf40aQ9R1C7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40aQ9R1C7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.44■□□□□ 0.7
Prpf40aQ9R1C7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40aQ9R1C7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40aQ9R1C7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40aQ9R1C7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Prpf40aQ9R1C7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40aQ9R1C7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40aQ9R1C7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40aQ9R1C7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40aQ9R1C7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Prpf40aQ9R1C7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40aQ9R1C7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Gm12527-201ENSMUST00000117967 564 ntBASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40aQ9R1C7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40aQ9R1C7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40aQ9R1C7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40aQ9R1C7 Gm11927-201ENSMUST00000118472 759 ntBASIC19.41■□□□□ 0.7
Prpf40aQ9R1C7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40aQ9R1C7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40aQ9R1C7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf40aQ9R1C7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms