Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AmfrQ9R049 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AmfrQ9R049 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AmfrQ9R049 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
AmfrQ9R049 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.79■□□□□ 0.76
AmfrQ9R049 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AmfrQ9R049 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
AmfrQ9R049 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
AmfrQ9R049 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AmfrQ9R049 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AmfrQ9R049 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
AmfrQ9R049 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AmfrQ9R049 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
AmfrQ9R049 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
AmfrQ9R049 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AmfrQ9R049 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AmfrQ9R049 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
AmfrQ9R049 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AmfrQ9R049 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AmfrQ9R049 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
AmfrQ9R049 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AmfrQ9R049 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.77■□□□□ 0.76
AmfrQ9R049 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
AmfrQ9R049 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.77■□□□□ 0.76
AmfrQ9R049 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Trmt13-210ENSMUST00000198454 880 ntBASIC19.77■□□□□ 0.76
AmfrQ9R049 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.77■□□□□ 0.76
AmfrQ9R049 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AmfrQ9R049 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
AmfrQ9R049 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.76■□□□□ 0.75
AmfrQ9R049 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
AmfrQ9R049 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
AmfrQ9R049 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.76■□□□□ 0.75
AmfrQ9R049 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
AmfrQ9R049 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AmfrQ9R049 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
AmfrQ9R049 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 Gm11249-201ENSMUST00000117071 859 ntBASIC19.75■□□□□ 0.75
AmfrQ9R049 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.75■□□□□ 0.75
AmfrQ9R049 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.75■□□□□ 0.75
AmfrQ9R049 Gm27275-201ENSMUST00000184318 272 ntBASIC19.75■□□□□ 0.75
AmfrQ9R049 Gm8520-201ENSMUST00000186517 868 ntBASIC19.75■□□□□ 0.75
AmfrQ9R049 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.75■□□□□ 0.75
AmfrQ9R049 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.75■□□□□ 0.75
AmfrQ9R049 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
AmfrQ9R049 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.75■□□□□ 0.75
AmfrQ9R049 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AmfrQ9R049 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.74■□□□□ 0.75
AmfrQ9R049 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AmfrQ9R049 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
AmfrQ9R049 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.74■□□□□ 0.75
AmfrQ9R049 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AmfrQ9R049 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AmfrQ9R049 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AmfrQ9R049 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
AmfrQ9R049 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
AmfrQ9R049 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AmfrQ9R049 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.74■□□□□ 0.75
AmfrQ9R049 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AmfrQ9R049 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AmfrQ9R049 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AmfrQ9R049 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.74■□□□□ 0.75
AmfrQ9R049 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AmfrQ9R049 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AmfrQ9R049 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms