Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3h8Q9JJ48 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h8Q9JJ48 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Fst-202ENSMUST00000223640 2612 ntBASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Mir5122-201ENSMUST00000175004 89 ntBASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h8Q9JJ48 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h8Q9JJ48 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h8Q9JJ48 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 Gm13401-201ENSMUST00000117074 291 ntBASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h8Q9JJ48 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms