Protein–RNA interactions for Protein: Q9JHE6

Hes6, Transcription cofactor HES-6, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes6Q9JHE6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.78■□□□□ 0.44
Hes6Q9JHE6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hes6Q9JHE6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hes6Q9JHE6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hes6Q9JHE6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Hes6Q9JHE6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hes6Q9JHE6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hes6Q9JHE6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hes6Q9JHE6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hes6Q9JHE6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hes6Q9JHE6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hes6Q9JHE6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.77■□□□□ 0.43
Hes6Q9JHE6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hes6Q9JHE6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Hes6Q9JHE6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hes6Q9JHE6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hes6Q9JHE6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.75■□□□□ 0.43
Hes6Q9JHE6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hes6Q9JHE6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hes6Q9JHE6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hes6Q9JHE6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hes6Q9JHE6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms