Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4bQ9ES00 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4bQ9ES00 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4bQ9ES00 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4bQ9ES00 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4bQ9ES00 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube4bQ9ES00 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube4bQ9ES00 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube4bQ9ES00 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube4bQ9ES00 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ube4bQ9ES00 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ube4bQ9ES00 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17■□□□□ 0.31
Ube4bQ9ES00 Serp2-204ENSMUST00000228055 705 ntBASIC17■□□□□ 0.31
Ube4bQ9ES00 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube4bQ9ES00 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube4bQ9ES00 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ube4bQ9ES00 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube4bQ9ES00 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17■□□□□ 0.31
Ube4bQ9ES00 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube4bQ9ES00 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube4bQ9ES00 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube4bQ9ES00 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ube4bQ9ES00 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4bQ9ES00 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms