Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tubb3Q9ERD7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tubb3Q9ERD7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.58■□□□□ 0.41
Tubb3Q9ERD7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Tubb3Q9ERD7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tubb3Q9ERD7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tubb3Q9ERD7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubb3Q9ERD7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Tubb3Q9ERD7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.58■□□□□ 0.4
Tubb3Q9ERD7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubb3Q9ERD7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubb3Q9ERD7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubb3Q9ERD7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Tubb3Q9ERD7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Gm12896-201ENSMUST00000118430 226 ntBASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Tubb3Q9ERD7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Gm27275-201ENSMUST00000184318 272 ntBASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Gm2559-201ENSMUST00000201323 363 ntBASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubb3Q9ERD7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubb3Q9ERD7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubb3Q9ERD7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms