Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Gm13401-201ENSMUST00000117074 291 ntBASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-4Q9EQM3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Birc2-201ENSMUST00000054878 378 ntBASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-4Q9EQM3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Il3ra-202ENSMUST00000223589 738 ntBASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nkx2-4Q9EQM3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Nkx2-4Q9EQM3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nkx2-4Q9EQM3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nkx2-4Q9EQM3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.14■□□□□ 0.5
Nkx2-4Q9EQM3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-4Q9EQM3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 Mir8098-201ENSMUST00000184011 137 ntBASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-4Q9EQM3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Gm13884-201ENSMUST00000118103 829 ntBASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Olfr129-201ENSMUST00000122318 993 ntBASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Gm45328-201ENSMUST00000210942 917 ntBASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-4Q9EQM3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nkx2-4Q9EQM3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nkx2-4Q9EQM3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nkx2-4Q9EQM3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-4Q9EQM3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms