Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Cpsf1Q9EPU4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Cpsf1Q9EPU4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Cpsf1Q9EPU4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cpsf1Q9EPU4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cpsf1Q9EPU4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Cpsf1Q9EPU4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cpsf1Q9EPU4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cpsf1Q9EPU4 Gm17661-201ENSMUST00000170317 270 ntBASIC24.55■■□□□ 1.52
Cpsf1Q9EPU4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cpsf1Q9EPU4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC24.55■■□□□ 1.52
Cpsf1Q9EPU4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cpsf1Q9EPU4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cpsf1Q9EPU4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cpsf1Q9EPU4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Cpsf1Q9EPU4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 Gm7638-201ENSMUST00000121348 967 ntBASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 Gm18032-201ENSMUST00000222541 538 ntBASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cpsf1Q9EPU4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cpsf1Q9EPU4 Gm37025-201ENSMUST00000195159 829 ntBASIC24.53■■□□□ 1.52
Cpsf1Q9EPU4 Gm9731-201ENSMUST00000209480 747 ntBASIC24.53■■□□□ 1.52
Cpsf1Q9EPU4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Cpsf1Q9EPU4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cpsf1Q9EPU4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Cpsf1Q9EPU4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Gm27463-201ENSMUST00000183569 57 ntBASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Gm43353-201ENSMUST00000199224 1295 ntBASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Il3ra-202ENSMUST00000223589 738 ntBASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Gm6659-201ENSMUST00000174752 547 ntBASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Gm7791-201ENSMUST00000219066 539 ntBASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Cpsf1Q9EPU4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cpsf1Q9EPU4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC24.51■■□□□ 1.51
Cpsf1Q9EPU4 Gm19721-201ENSMUST00000195284 1764 ntBASIC24.51■■□□□ 1.51
Cpsf1Q9EPU4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Cpsf1Q9EPU4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cpsf1Q9EPU4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cpsf1Q9EPU4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cpsf1Q9EPU4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cpsf1Q9EPU4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cpsf1Q9EPU4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Cpsf1Q9EPU4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cpsf1Q9EPU4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Cpsf1Q9EPU4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cpsf1Q9EPU4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
Cpsf1Q9EPU4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cpsf1Q9EPU4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC24.49■■□□□ 1.51
Cpsf1Q9EPU4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cpsf1Q9EPU4 Gm4217-201ENSMUST00000182243 1002 ntBASIC24.49■■□□□ 1.51
Cpsf1Q9EPU4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Cpsf1Q9EPU4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cpsf1Q9EPU4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC24.49■■□□□ 1.51
Cpsf1Q9EPU4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cpsf1Q9EPU4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC24.48■■□□□ 1.51
Cpsf1Q9EPU4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC24.48■■□□□ 1.51
Cpsf1Q9EPU4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cpsf1Q9EPU4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cpsf1Q9EPU4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cpsf1Q9EPU4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cpsf1Q9EPU4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cpsf1Q9EPU4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC24.48■■□□□ 1.51
Cpsf1Q9EPU4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cpsf1Q9EPU4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cpsf1Q9EPU4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cpsf1Q9EPU4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cpsf1Q9EPU4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC24.47■■□□□ 1.51
Cpsf1Q9EPU4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cpsf1Q9EPU4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
Cpsf1Q9EPU4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC24.47■■□□□ 1.51
Cpsf1Q9EPU4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms