Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Gm18666-201ENSMUST00000190039 958 ntBASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2aQ9DB34 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Chmp2aQ9DB34 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Gm5643-201ENSMUST00000117081 966 ntBASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Gm22240-201ENSMUST00000175225 82 ntBASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.45■□□□□ 0.54
Chmp2aQ9DB34 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2aQ9DB34 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.43■□□□□ 0.54
Chmp2aQ9DB34 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Gm10138-203ENSMUST00000206952 366 ntBASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2aQ9DB34 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Gm15375-201ENSMUST00000119510 849 ntBASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms