Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Mir1199-201ENSMUST00000117015 119 ntBASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Fst-202ENSMUST00000223640 2612 ntBASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.28■□□□□ 0.04
Ssmem1Q9D9Y8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssmem1Q9D9Y8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ssmem1Q9D9Y8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ssmem1Q9D9Y8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ssmem1Q9D9Y8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ssmem1Q9D9Y8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssmem1Q9D9Y8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Gm29791-202ENSMUST00000207888 369 ntBASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssmem1Q9D9Y8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssmem1Q9D9Y8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms