Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Gm13401-201ENSMUST00000117074 291 ntBASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc7Q9D541 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7Q9D541 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ccdc7Q9D541 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7Q9D541 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.71■□□□□ 0.91
Ccdc7Q9D541 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7Q9D541 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7Q9D541 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7Q9D541 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc7Q9D541 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7Q9D541 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7Q9D541 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc7Q9D541 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7Q9D541 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Gm12933-201ENSMUST00000120203 872 ntBASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Mtag2-201ENSMUST00000058665 714 ntBASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7Q9D541 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Gm37179-201ENSMUST00000194862 823 ntBASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7Q9D541 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc7Q9D541 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms