Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Trim42Q9D2H5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Gm38205-201ENSMUST00000192243 258 ntBASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim42Q9D2H5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim42Q9D2H5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Gm13241-201ENSMUST00000094493 780 ntBASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim42Q9D2H5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Mir7075-201ENSMUST00000184187 82 ntBASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trim42Q9D2H5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms