Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Gm45417-201ENSMUST00000209533 758 ntBASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.63■□□□□ 0.41
Ssu72Q9CY97 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.62■□□□□ 0.41
Ssu72Q9CY97 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssu72Q9CY97 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssu72Q9CY97 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssu72Q9CY97 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ssu72Q9CY97 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ssu72Q9CY97 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ssu72Q9CY97 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssu72Q9CY97 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssu72Q9CY97 Gm13216-201ENSMUST00000117145 591 ntBASIC17.58■□□□□ 0.4
Ssu72Q9CY97 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.58■□□□□ 0.4
Ssu72Q9CY97 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssu72Q9CY97 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.58■□□□□ 0.4
Ssu72Q9CY97 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssu72Q9CY97 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Gm29791-202ENSMUST00000207888 369 ntBASIC17.57■□□□□ 0.4
Ssu72Q9CY97 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms