Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Khdc3Q9CWU5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Flg-201ENSMUST00000050758 1488 ntBASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Khdc3Q9CWU5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.98■□□□□ 0.31
Khdc3Q9CWU5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Gm38285-201ENSMUST00000192928 922 ntBASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Zfp783-201ENSMUST00000095946 670 ntBASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Khdc3Q9CWU5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Khdc3Q9CWU5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Gm4968-201ENSMUST00000071458 858 ntBASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Khdc3Q9CWU5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.94■□□□□ 0.3
Khdc3Q9CWU5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Khdc3Q9CWU5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms