Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc3Q9CW03 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.83■□□□□ 0.93
Smc3Q9CW03 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Smc3Q9CW03 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smc3Q9CW03 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc3Q9CW03 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc3Q9CW03 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc3Q9CW03 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.82■□□□□ 0.92
Smc3Q9CW03 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Gm7291-201ENSMUST00000199147 382 ntBASIC20.82■□□□□ 0.92
Smc3Q9CW03 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.82■□□□□ 0.92
Smc3Q9CW03 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc3Q9CW03 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.81■□□□□ 0.92
Smc3Q9CW03 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc3Q9CW03 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc3Q9CW03 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc3Q9CW03 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc3Q9CW03 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc3Q9CW03 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc3Q9CW03 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc3Q9CW03 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.79■□□□□ 0.92
Smc3Q9CW03 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Smc3Q9CW03 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc3Q9CW03 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smc3Q9CW03 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc3Q9CW03 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Gm26571-201ENSMUST00000181399 666 ntBASIC20.78■□□□□ 0.92
Smc3Q9CW03 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc3Q9CW03 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc3Q9CW03 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Smc3Q9CW03 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc3Q9CW03 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.77■□□□□ 0.92
Smc3Q9CW03 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smc3Q9CW03 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc3Q9CW03 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc3Q9CW03 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc3Q9CW03 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.77■□□□□ 0.92
Smc3Q9CW03 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Smc3Q9CW03 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc3Q9CW03 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc3Q9CW03 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc3Q9CW03 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smc3Q9CW03 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Smc3Q9CW03 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc3Q9CW03 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc3Q9CW03 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc3Q9CW03 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Smc3Q9CW03 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc3Q9CW03 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc3Q9CW03 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.76■□□□□ 0.91
Smc3Q9CW03 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc3Q9CW03 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc3Q9CW03 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc3Q9CW03 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms