Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc43Q9CR29 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 Gm5408-201ENSMUST00000197998 747 ntBASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc43Q9CR29 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Gm12933-201ENSMUST00000120203 872 ntBASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Tgds-204ENSMUST00000228543 1594 ntBASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc43Q9CR29 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc43Q9CR29 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc43Q9CR29 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc43Q9CR29 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc43Q9CR29 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc43Q9CR29 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc43Q9CR29 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc43Q9CR29 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ccdc43Q9CR29 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc43Q9CR29 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.63■□□□□ 0.73
Ccdc43Q9CR29 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc43Q9CR29 Gm10602-201ENSMUST00000098239 609 ntBASIC19.63■□□□□ 0.73
Ccdc43Q9CR29 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc43Q9CR29 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc43Q9CR29 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.62■□□□□ 0.73
Ccdc43Q9CR29 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc43Q9CR29 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc43Q9CR29 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc43Q9CR29 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc43Q9CR29 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc43Q9CR29 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms