Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.49□□□□□ -0.09
Rer1Q9CQU3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rer1Q9CQU3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Gm7291-201ENSMUST00000199147 382 ntBASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rer1Q9CQU3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Gm10849-201ENSMUST00000100397 618 ntBASIC14.47□□□□□ -0.09
Rer1Q9CQU3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Gm8969-201ENSMUST00000199694 526 ntBASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rer1Q9CQU3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Gm7290-201ENSMUST00000104990 617 ntBASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Gm12918-201ENSMUST00000120234 636 ntBASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Gm15710-201ENSMUST00000121821 636 ntBASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Gm5075-201ENSMUST00000196916 622 ntBASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.46□□□□□ -0.09
Rer1Q9CQU3 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.46□□□□□ -0.09
Rer1Q9CQU3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rer1Q9CQU3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Rer1Q9CQU3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rer1Q9CQU3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rer1Q9CQU3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Gm6211-202ENSMUST00000167849 925 ntBASIC14.45□□□□□ -0.1
Rer1Q9CQU3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rer1Q9CQU3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms