Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb1Q9CQ70 Zfp783-201ENSMUST00000095946 670 ntBASIC14.49□□□□□ -0.09
H2afb1Q9CQ70 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb1Q9CQ70 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb1Q9CQ70 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb1Q9CQ70 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb1Q9CQ70 Flg-201ENSMUST00000050758 1488 ntBASIC14.49□□□□□ -0.09
H2afb1Q9CQ70 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb1Q9CQ70 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb1Q9CQ70 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
H2afb1Q9CQ70 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb1Q9CQ70 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
H2afb1Q9CQ70 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Gm10418-201ENSMUST00000100943 576 ntBASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Mir5133-201ENSMUST00000174955 77 ntBASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Gm27405-201ENSMUST00000184201 112 ntBASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1Q9CQ70 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Gm26524-201ENSMUST00000192339 390 ntBASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1Q9CQ70 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.46□□□□□ -0.1
H2afb1Q9CQ70 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb1Q9CQ70 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb1Q9CQ70 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb1Q9CQ70 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb1Q9CQ70 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Rab3c-203ENSMUST00000224180 967 ntBASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms