Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.84■□□□□ 0.93
Hdac9Q99N13 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Gm21559-201ENSMUST00000220638 855 ntBASIC20.84■□□□□ 0.93
Hdac9Q99N13 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.84■□□□□ 0.93
Hdac9Q99N13 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Gm8587-201ENSMUST00000076538 843 ntBASIC20.84■□□□□ 0.93
Hdac9Q99N13 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac9Q99N13 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac9Q99N13 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.83■□□□□ 0.93
Hdac9Q99N13 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac9Q99N13 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac9Q99N13 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.83■□□□□ 0.93
Hdac9Q99N13 Gm29791-202ENSMUST00000207888 369 ntBASIC20.83■□□□□ 0.93
Hdac9Q99N13 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Hdac9Q99N13 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac9Q99N13 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac9Q99N13 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac9Q99N13 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac9Q99N13 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac9Q99N13 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac9Q99N13 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac9Q99N13 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac9Q99N13 Mir1668-201ENSMUST00000184114 107 ntBASIC20.81■□□□□ 0.92
Hdac9Q99N13 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.81■□□□□ 0.92
Hdac9Q99N13 Gm5587-201ENSMUST00000206270 674 ntBASIC20.81■□□□□ 0.92
Hdac9Q99N13 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac9Q99N13 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac9Q99N13 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac9Q99N13 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac9Q99N13 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac9Q99N13 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac9Q99N13 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Hdac9Q99N13 Gm7370-201ENSMUST00000219471 767 ntBASIC20.8■□□□□ 0.92
Hdac9Q99N13 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.8■□□□□ 0.92
Hdac9Q99N13 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac9Q99N13 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.8■□□□□ 0.92
Hdac9Q99N13 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac9Q99N13 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac9Q99N13 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hdac9Q99N13 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.79■□□□□ 0.92
Hdac9Q99N13 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac9Q99N13 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac9Q99N13 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac9Q99N13 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac9Q99N13 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac9Q99N13 Gm9013-201ENSMUST00000132939 882 ntBASIC20.79■□□□□ 0.92
Hdac9Q99N13 Gm37025-201ENSMUST00000195159 829 ntBASIC20.79■□□□□ 0.92
Hdac9Q99N13 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac9Q99N13 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.79■□□□□ 0.92
Hdac9Q99N13 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac9Q99N13 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.78■□□□□ 0.92
Hdac9Q99N13 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Tgds-204ENSMUST00000228543 1594 ntBASIC20.78■□□□□ 0.92
Hdac9Q99N13 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.78■□□□□ 0.92
Hdac9Q99N13 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Hdac9Q99N13 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac9Q99N13 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac9Q99N13 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms