Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.42■□□□□ 0.86
Rfc4Q99J62 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc4Q99J62 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc4Q99J62 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rfc4Q99J62 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfc4Q99J62 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfc4Q99J62 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfc4Q99J62 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rfc4Q99J62 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Rfc4Q99J62 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfc4Q99J62 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfc4Q99J62 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfc4Q99J62 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfc4Q99J62 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rfc4Q99J62 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.39■□□□□ 0.86
Rfc4Q99J62 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rfc4Q99J62 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rfc4Q99J62 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rfc4Q99J62 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfc4Q99J62 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfc4Q99J62 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfc4Q99J62 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfc4Q99J62 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rfc4Q99J62 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfc4Q99J62 Gm13474-201ENSMUST00000122466 815 ntBASIC20.38■□□□□ 0.85
Rfc4Q99J62 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.38■□□□□ 0.85
Rfc4Q99J62 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.38■□□□□ 0.85
Rfc4Q99J62 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rfc4Q99J62 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfc4Q99J62 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfc4Q99J62 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.38■□□□□ 0.85
Rfc4Q99J62 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfc4Q99J62 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Rfc4Q99J62 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.37■□□□□ 0.85
Rfc4Q99J62 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Rfc4Q99J62 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfc4Q99J62 Gm7284-201ENSMUST00000131667 944 ntBASIC20.37■□□□□ 0.85
Rfc4Q99J62 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.37■□□□□ 0.85
Rfc4Q99J62 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rfc4Q99J62 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfc4Q99J62 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfc4Q99J62 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rfc4Q99J62 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfc4Q99J62 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfc4Q99J62 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfc4Q99J62 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rfc4Q99J62 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.36■□□□□ 0.85
Rfc4Q99J62 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.36■□□□□ 0.85
Rfc4Q99J62 Gm17661-201ENSMUST00000170317 270 ntBASIC20.36■□□□□ 0.85
Rfc4Q99J62 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfc4Q99J62 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.36■□□□□ 0.85
Rfc4Q99J62 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Gm7638-201ENSMUST00000121348 967 ntBASIC20.35■□□□□ 0.85
Rfc4Q99J62 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rfc4Q99J62 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.35■□□□□ 0.85
Rfc4Q99J62 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc4Q99J62 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms