Protein–RNA interactions for Protein: Q91ZQ5

Rpe65, Retinoid isomerohydrolase, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpe65Q91ZQ5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpe65Q91ZQ5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rpe65Q91ZQ5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Gm10418-201ENSMUST00000100943 576 ntBASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Gm5417-201ENSMUST00000079706 384 ntBASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpe65Q91ZQ5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpe65Q91ZQ5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Gm10517-202ENSMUST00000192970 758 ntBASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rpe65Q91ZQ5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Gm15565-201ENSMUST00000118890 427 ntBASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Gm21814-202ENSMUST00000203277 873 ntBASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Gm29791-202ENSMUST00000207888 369 ntBASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Timm23-208ENSMUST00000226683 750 ntBASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpe65Q91ZQ5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpe65Q91ZQ5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpe65Q91ZQ5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Rpe65Q91ZQ5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.1■□□□□ 0.33
Rpe65Q91ZQ5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpe65Q91ZQ5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpe65Q91ZQ5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms