Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Mir6982-201ENSMUST00000184354 68 ntBASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Gm29791-202ENSMUST00000207888 369 ntBASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha11Q91Y19 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Pcdha11Q91Y19 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha11Q91Y19 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha11Q91Y19 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha11Q91Y19 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha11Q91Y19 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha11Q91Y19 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha11Q91Y19 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha11Q91Y19 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdha11Q91Y19 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdha11Q91Y19 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha11Q91Y19 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdha11Q91Y19 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha11Q91Y19 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.58■□□□□ 0.56
Pcdha11Q91Y19 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdha11Q91Y19 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha11Q91Y19 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Mir5122-201ENSMUST00000175004 89 ntBASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.56■□□□□ 0.56
Pcdha11Q91Y19 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms