Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Pcdha9Q91Y11 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdha9Q91Y11 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pcdha9Q91Y11 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha9Q91Y11 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha9Q91Y11 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha9Q91Y11 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha9Q91Y11 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdha9Q91Y11 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Gm8969-201ENSMUST00000199694 526 ntBASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Pcdha9Q91Y11 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Gm12382-201ENSMUST00000122005 922 ntBASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.81■□□□□ 0.6
Pcdha9Q91Y11 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha9Q91Y11 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha9Q91Y11 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha9Q91Y11 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdha9Q91Y11 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha9Q91Y11 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha9Q91Y11 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha9Q91Y11 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha9Q91Y11 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha9Q91Y11 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha9Q91Y11 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha9Q91Y11 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha9Q91Y11 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Mir8112-201ENSMUST00000184382 131 ntBASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdha9Q91Y11 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha9Q91Y11 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms