Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Gm20049-201ENSMUST00000219950 730 ntBASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb1Q91Y08 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb1Q91Y08 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.39■□□□□ 0.54
Pcdhb1Q91Y08 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb1Q91Y08 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.54
Pcdhb1Q91Y08 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.39■□□□□ 0.54
Pcdhb1Q91Y08 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb1Q91Y08 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb1Q91Y08 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb1Q91Y08 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb1Q91Y08 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb1Q91Y08 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Gm15375-201ENSMUST00000119510 849 ntBASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb1Q91Y08 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Gm27275-201ENSMUST00000184318 272 ntBASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb1Q91Y08 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 Gm11643-201ENSMUST00000119578 864 ntBASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 Gm13158-201ENSMUST00000122007 736 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms