Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb20Q91XZ9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb20Q91XZ9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb20Q91XZ9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb20Q91XZ9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb20Q91XZ9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb20Q91XZ9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb20Q91XZ9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 AC124408.1-201ENSMUST00000228938 707 ntBASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb20Q91XZ9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Gm25116-201ENSMUST00000157191 122 ntBASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Gm28745-201ENSMUST00000190069 305 ntBASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb20Q91XZ9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Mir6982-201ENSMUST00000184354 68 ntBASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb20Q91XZ9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms