Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Gm18101-201ENSMUST00000215769 548 ntBASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.88■□□□□ 0.93
Pcdhb5Q91XZ5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Gm7791-201ENSMUST00000219066 539 ntBASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb5Q91XZ5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb5Q91XZ5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Gm16061-201ENSMUST00000122167 857 ntBASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Gm6345-202ENSMUST00000180900 204 ntBASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb5Q91XZ5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb5Q91XZ5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb5Q91XZ5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb5Q91XZ5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb5Q91XZ5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb5Q91XZ5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb5Q91XZ5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb5Q91XZ5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdhb5Q91XZ5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb5Q91XZ5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb5Q91XZ5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb5Q91XZ5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb5Q91XZ5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb5Q91XZ5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Pcdhb5Q91XZ5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Pcdhb5Q91XZ5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Pcdhb5Q91XZ5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb5Q91XZ5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms