Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga9Q91XX9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga9Q91XX9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga9Q91XX9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga9Q91XX9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Pcdhga9Q91XX9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga9Q91XX9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga9Q91XX9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga9Q91XX9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga9Q91XX9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga9Q91XX9 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.51■□□□□ 0.39
Pcdhga9Q91XX9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.51■□□□□ 0.39
Pcdhga9Q91XX9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhga9Q91XX9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhga9Q91XX9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga9Q91XX9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga9Q91XX9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Mir6349-201ENSMUST00000184059 97 ntBASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga9Q91XX9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga9Q91XX9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pcdhga9Q91XX9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga9Q91XX9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms