Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc5Q91XW9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Gm10138-203ENSMUST00000206952 366 ntBASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.16■□□□□ 0.82
Pcdhgc5Q91XW9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Gm15375-201ENSMUST00000119510 849 ntBASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Gm3375-201ENSMUST00000203929 796 ntBASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc5Q91XW9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhgc5Q91XW9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhgc5Q91XW9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.14■□□□□ 0.82
Pcdhgc5Q91XW9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdhgc5Q91XW9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgc5Q91XW9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgc5Q91XW9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgc5Q91XW9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.14■□□□□ 0.81
Pcdhgc5Q91XW9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.14■□□□□ 0.81
Pcdhgc5Q91XW9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgc5Q91XW9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgc5Q91XW9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.14■□□□□ 0.81
Pcdhgc5Q91XW9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgc5Q91XW9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgc5Q91XW9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhgc5Q91XW9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc5Q91XW9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 Odf3b-204ENSMUST00000227834 930 ntBASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc5Q91XW9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms